Insertion junction: CLIP2.053708_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053708
Chromosome:chromosome 17
Location:6352517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g743547 (1 of 16) IPR003439//IPR003593//IPR013525//IPR027417 - ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCCTGTGGGCCAAGGTGGTCGGGACTACGGTACACGCCACGTCATGC
Internal bar code:ATCCCATAACGATTCACGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2319
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGCACCAACATCCAGGG
Suggested primer 2:CTTGTGTGCCCTACTGCTCA