Insertion junction: CLIP2.053708_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053708
Chromosome:chromosome 17
Location:6352519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g743547 (1 of 16) IPR003439//IPR003593//IPR013525//IPR027417 - ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTCGTGGCCGCAGCCAACTCACGTGTACTGCACTGCTCTTGTTGTCT
Internal bar code:AGATTGGAATCCTTATGGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2997
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGTGCCCTACTGCTCA
Suggested primer 2:ATCAGCACCAACATCCAGGG