Insertion junction: CLIP2.053710_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053710
Chromosome:chromosome 8
Location:3882159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381900 (1 of 2) PTHR22763:SF71 - PROTEIN Y105C5B.11, ISOFORM B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTCGTTAAGTTTGTTCACACTGAGAAACACTGGAAACACCCCCTGCCC
Internal bar code:GCCGCCATTGCTAACCGGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:136
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCACAAGACAGGCAC
Suggested primer 2:CGCATGTACCCGATCATCGA