Insertion junction: CLIP2.053730_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053730
Chromosome:chromosome 2
Location:3073647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095900 ROC114,ROC108 Rhythm Of Chloroplast 114; (1 of 13) PF00646 - F-box domain (F-box) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCGCGAAGCCCCAGAAACCCTCCCTGAGGCCTCCTCTGGCCGGACA
Internal bar code:ATATACCCACAGTGCTGGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2456
LEAP-Seq percent confirming:97.8261
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTCCCCCGCATCAAGAAG
Suggested primer 2:CGCATCAACCAGTTGCACAA