Insertion junction: CLIP2.053731_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053731
Chromosome:chromosome 7
Location:994698
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g319500 (1 of 2) 2.3.2.15 - Glutathione gamma-glutamylcysteinyltransferase / Phytochelatin synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCATGCCCTTCAGCTCGTCCAGCAGCTGCTGCCGCTGCGCCATCGGG
Internal bar code:TATCATTGGAAATCCCTTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1658
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCCGAGGAAAAGCAGACG
Suggested primer 2:GCACCTACAAACCCTCTCCC