Insertion junction: CLIP2.053736_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053736
Chromosome:chromosome 17
Location:476300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699000 PAT1 Phosphate acetyltransferase; (1 of 2) 2.3.1.8 - Phosphate acetyltransferase / Phosphotransacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTATGTGTGAGTATGCGTGTGCGTGCGCGGAGTGGGGGCGGCGTTTG
Internal bar code:TGGCTAGTAGCAGCAGACGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1418
LEAP-Seq percent confirming:74.4186
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTAAGGCACGGTCAAGT
Suggested primer 2:GTGCCTGTGCTCCACTAGTT