Insertion junction: CLIP2.053741_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053741
Chromosome:chromosome 1
Location:633642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003550 (1 of 2) PTHR12231//PTHR12231:SF112 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCCGGGTCATGCCGCCCCAGGGCTGCTGCCCCAGGGCCGCCGCCTC
Internal bar code:GTTAAGGAGATTAACAGACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1496
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAACAGGCGCAAAACCTA
Suggested primer 2:GTGTGTGTGCAACGATGGTC