Insertion junction: CLIP2.053746_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053746
Chromosome:chromosome 13
Location:4053840
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590800 HTA21,HTA37 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGGCAAGAAGGCCGTGAGCCGCAGCGCCAAGGCGGGCCTGCAATTCC
Internal bar code:GAAATGCAGGTTCACCGTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4250
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGCAGGTTGGCACTACC
Suggested primer 2:TCCTTGGCAGCCTTCTTAGC