Insertion junction: CLIP2.053776_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053776
Chromosome:chromosome 1
Location:3376119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021900 PUS11 (1 of 1) PTHR11142:SF10 - TRNA PSEUDOURIDINE SYNTHASE; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCCGCCTTCGCTTGCGCCAGTCGCTGTGGCGGCTGAGGCGCCAACGG
Internal bar code:TATGCTAGACCGTTGTTAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCCGTCTGCCTGAACAA
Suggested primer 2:CCTGCTTAGCCCTACCGATG