Insertion junction: CLIP2.053787_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053787
Chromosome:chromosome 12
Location:9368328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541700 OPR54 OctotricoPeptide Repeat protein 54 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGGTTCCGTTTAGCTTGGGCTGGTACCTACAATCCCCTCCTGCCCGCC
Internal bar code:ATGCATCGGAATGAGGGAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1164
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATGGATGCACAACAGCG
Suggested primer 2:TGAGACATGCAGCGCTGTAA