Insertion junction: CLIP2.053787_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053787
Chromosome:chromosome 12
Location:9368329
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541700 OPR54 OctotricoPeptide Repeat protein 54 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAATGGAGGGGCGGGCCGGAGGAGTGGAGGGCGGGCGGCGCGGTGGG
Internal bar code:TACAGAGCGGGCAGATATGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGACATGCAGCGCTGTAA
Suggested primer 2:CGTATGGATGCACAACAGCG