Insertion junction: CLIP2.053798_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053798
Chromosome:chromosome 15
Location:5321229
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801847 (1 of 12) IPR011010//IPR013762 - DNA breaking-rejoining enzyme, catalytic core // Integrase-like, catalytic domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGGAAGGGCAGCGCCGTGTTGTCGGGGTTTACGAAGTCGCCAGTGC
Internal bar code:TCCGAACCCGTCTCATCAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3257
LEAP-Seq percent confirming:8.82353
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTAGCGGCATACGTCATG
Suggested primer 2:AGACTTCGCAACCACTCCTG