Insertion junction: CLIP2.053809_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053809
Chromosome:chromosome 1
Location:231555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001450 Predicted protein; (1 of 29) PF00612 - IQ calmodulin-binding motif (IQ) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCAACGACTCGGCCCAGCGGCCCGTCAGTCCCCAACCGCCCCGTGCG
Internal bar code:CCAAATCGGATACTAAAGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3141
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AACGACTCGGGATCCTGGTA
Suggested primer 2:GCACGAACCCAATTGCACTT