Insertion junction: CLIP2.053813_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053813
Chromosome:chromosome 12
Location:6661557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00110460

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAAACCGCGTGTCAGCGCGCTTAGAAGCACGTGTTATGCCCGCGTGCAT
Internal bar code:AATGTCTAAACATAATGGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1528
LEAP-Seq percent confirming:48.5714
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGATCTGTGCATGTTGA
Suggested primer 2:CGTTTTGCTGGCTCGCTATC