Insertion junction: CLIP2.053814_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053814
Chromosome:chromosome 1
Location:7885351
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g055440 CSR8 Carbohydrate sulfotransferase-related 8; (1 of 1) 2.8.2.30 - [Heparan sulfate]-glucosamine 3-sulfotransferase 3 / Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGATGGACGCACAGCCAGGAAAGCAGGGCACGCAGCGAAGACTTGCT
Internal bar code:CTCAGCGTTAGGCATATACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1431
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTTCCTGGAGTTCAAGA
Suggested primer 2:GTCAGCAGGTCGTGTGTGTA