Insertion junction: CLIP2.053833_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053833
Chromosome:chromosome 12
Location:6005674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534350 HCD2 (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD; 3-hydroxyacyl-CoA dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAATTGCGCAAGTGATTGCCAGTCGCGGCATGAACGTGCTGCTCAACG
Internal bar code:ATGGATGAGCTCTAGAGATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1039
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACCTCCTTCTTGAGCGC
Suggested primer 2:GGTCGCTTGCATATGCTTGG