Insertion junction: CLIP2.053838_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053838
Chromosome:chromosome 6
Location:1136669
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g257800 POL1B,POL1-1 (1 of 2) IPR001098//IPR002298 - DNA-directed DNA polymerase, family A, palm domain // DNA polymerase A; DNA polymerase I, probably mitochondrial intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGGGCACGACAGACATCATGCAGCCATAATGCAGTGTACTTGCGCAG
Internal bar code:CAATGGATTACTACAGGTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1571
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGTATCGTATCCGGGG
Suggested primer 2:ATCTCATCCAGCAGCGACAG