Insertion junction: CLIP2.053840_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053840
Chromosome:chromosome 3
Location:7835134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202875 CDS
Cre03.g202900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCTCAAGCACGGCGGCCTTACCGACGGGTCCGACTCCCCGGATGCGG
Internal bar code:TGGAGCGTCCGATTAACGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2826
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGTCAAGGTCCAGCTCG
Suggested primer 2:TAACTGAGCCACGAGTGCAG