Insertion junction: CLIP2.053840_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053840
Chromosome:chromosome 3
Location:7835134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202875 CDS
Cre03.g202900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGCGCCGCCGCCGCCAGGTTGCGCCCCGACTCTAAGGCATTGCTGAC
Internal bar code:GACGAATAGCAGTAGGCATGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3394
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:TAACTGAGCCACGAGTGCAG
Suggested primer 2:CTGAGTCAAGGTCCAGCTCG