Insertion junction: CLIP2.053848_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053848
Chromosome:chromosome 12
Location:4121026
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g517050 FAP117 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 117 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCACGCATATACGCCCGTCCGCCCTTAAGCGTGTGCCTTACCCTGTA
Internal bar code:TCCGTATGAGCCCCGAGACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:494
LEAP-Seq percent confirming:60.7143
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTCGCGTGTTAAGACTT
Suggested primer 2:CTCCTTCCCGTTGTTGCTCT