Insertion junction: CLIP2.053850_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053850
Chromosome:chromosome 6
Location:3118362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275450 (1 of 1) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCCAAACTAAACCCAGTAATATGGGAGGCGTGTAGGCGAGGCGGGGG
Internal bar code:AACACCAACGCTCTCAGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:449
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCAAGCTTCCTTCTCACG
Suggested primer 2:AGGGAGTGAGATGCAGGCTA