Insertion junction: CLIP2.053858_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.053858
Chromosome:chromosome 11
Location:2515953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095103 GT90-34,GT90F34 GT90 family protein 34; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCTTTTTGCGGTGCGGTTGTGACCGTGTACGTGTCTGTGTATCTGTC
Internal bar code:TCCCGGATGTTTGTAACCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2447
LEAP-Seq percent confirming:97.5904
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCTGGGCTCTCTTTCC
Suggested primer 2:AACGGATGGCTACTGACACG