Insertion junction: CLIP2.053860_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053860
Chromosome:chromosome 11
Location:1183965
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467683 (1 of 40) 3.4.24.38 - Gametolysin / Lysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGAGTGGGGGCCTGCCATCGACTTGGAGCCGAAGGTACTTTAGCCC
Internal bar code:CATAGCCGAATTTGATATCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:800
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTATGCATGCTTTGACGG
Suggested primer 2:GCTCCGTCAGTTTGGAAGGA