Insertion junction: CLIP2.053863_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053863
Chromosome:chromosome 4
Location:3151755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226100 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGGACGAAACCTGCGCACCTTGCAGCCCCAATATGTGGTCGACAAGG
Internal bar code:GTTGCAGTCCGATAGACAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2250
LEAP-Seq percent confirming:96.25
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:CACCAAACTCAGGCACAACG
Suggested primer 2:GGGTCGCCCGACTTAAAGAA