Insertion junction: CLIP2.053871_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053871
Chromosome:chromosome 10
Location:2186559
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g433550 DNL4,LIG4,LIG2 (1 of 21) IPR001357 - BRCT domain; DNA ligase 4 intron
Cre10.g801121 (1 of 1) PTHR10459:SF7 - DNA LIGASE 4 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACATACACACACGCACCCCCCCCCCCACACACACACACAAATACAG
Internal bar code:CTCATGGCCGGAGTATACAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:112
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGCCAGGTACAAAGGTA
Suggested primer 2:ACTTAGTGGGCGGGATTTGG