Insertion junction: CLIP2.053874_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053874
Chromosome:chromosome 3
Location:5769594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g187500 (1 of 1) PTHR23339:SF64 - CYCLIN-DEPENDENT KINASE INHIBITOR 3; Dual specificity phosphatase outside_mRNA
Cre03.g187550 (1 of 1) PF04858 - TH1 protein (TH1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAGCCCGACGCCCTGCTCCGTACAGACTAGAGGCAGGGTAGCGACGGGC
Internal bar code:TCGTAAAGATGGCAGTGCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1932
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGTTGCGTGCATGTTGG
Suggested primer 2:CGGTTTAGACCACGGTGACA