Insertion junction: CLIP2.053879_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053879
Chromosome:chromosome 6
Location:7756642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g303000 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAACCGCGGCCTGGTGCCGCTGTCGGCGCTGACCGGGCTGACCTGCCT
Internal bar code:GTGAGGGAGTCTATGCCACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1476
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATGGACGTACAAGGTCA
Suggested primer 2:TCATGAAGGTGAGGGGGCTA