Insertion junction: CLIP2.053886_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053886
Chromosome:chromosome 10
Location:603944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g421650 paralog of LCI36; (1 of 4) K15382 - solute carrier family 50 (sugar transporter) (SLC50A, SWEET) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAGATGTTGAAGTCCTGTGCGCGGTGTGGGTTGTGTGCGGTTTGGAG
Internal bar code:AGATTGTTGCAAGAATTCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:967
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCGGCATGGAAGTTACG
Suggested primer 2:GTGTAGGGGTTGAGCAGCAT