Insertion junction: CLIP2.053905_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053905
Chromosome:chromosome 12
Location:4893112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524000 SUC1,GTR7 (1 of 1) 2.4.1.14 - Sucrose-phosphate synthase / UDP-glucose-fructose-phosphate glucosyltransferase; Sucrose-phosphate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGCCTTGCCCCATCTGGCGCACGGTAGCTGCTAACGCACTACTGACG
Internal bar code:AACCGGCCCGTTCACCGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:855
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTAACTCGAGCTGCTGTA
Suggested primer 2:CTCACCAATCCCAGGGACAC