Insertion junction: CLIP2.053906_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053906
Chromosome:chromosome 2
Location:7193938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00137361

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTGGCCTGAAACGATGGGTGTCATCCATGGCCGCGAAGTCGACAGCG
Internal bar code:GTACGCGCGCGTAAATTACTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4602
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTTTGTCACAAGTGCCG
Suggested primer 2:TCAGTGAGGAGACGTGCAAC