Insertion junction: CLIP2.053906_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.053906
Chromosome:chromosome 2
Location:7193938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00137361

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAAAGCAGAAGCAGAGCATGTGTGCAGGTTGTGAGTTTCTGTCAGGC
Internal bar code:TGAAATTGATCAATTTGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2966
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTGAGGAGACGTGCAAC
Suggested primer 2:CCACTTTGTCACAAGTGCCG