Insertion junction: CLIP2.053924_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053924
Chromosome:chromosome 12
Location:6020259
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g534550 PHR4 (1 of 1) PTHR11455:SF2 - BLUE-LIGHT PHOTORECEPTOR PHR2; Putative photolyase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATAGCGCAGTGGCCATGCGCGGCCCACGCTTTGTGTGAAGGTTCTCC
Internal bar code:AAAGGCCAATATGAATATCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3742
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCCATCACCTGTGGCTG
Suggested primer 2:CGTCTGCGGTAACAGGCATA