Insertion junction: CLIP2.053926_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053926
Chromosome:chromosome 11
Location:3704379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478800 (1 of 1) PTHR31027//PTHR31027:SF2 - FAMILY NOT NAMED // PROTEIN F18H3.4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGGTCCTCCTTGGCTGGCGCCGGCGCCGGCTTCTCCTCCTCCTTGG
Internal bar code:GTTAGCCACTTAAATCAATCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1077
LEAP-Seq percent confirming:55.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTGTCAGTAGGGCGTC
Suggested primer 2:CTTCATTTCTGCGCTACGGC