Insertion junction: CLIP2.053930_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053930
Chromosome:chromosome 8
Location:3421765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g378200 PPO1 (1 of 1) 5.1.99.6 - NAD(P)H-hydrate epimerase / NAD(P)HX epimerase; Pyridoxamine 5'-phosphate oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTGCATCCACTCCCCCTCACTGTTCCCATGACCCCTGGATCCAAACC
Internal bar code:TGTACGAGCGACATAGTTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:652
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGTGTGTGTGTGTGTGT
Suggested primer 2:GTCGGGTTGTGCACTACAGA