Insertion junction: CLIP2.053948_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053948
Chromosome:chromosome 7
Location:196117
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313450 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACCGGAAGGGAGGGAGGTAAGGGGCAGGAAAGCAGCGGGCGCAGCCGT
Internal bar code:GAACTCTTACAGGGGGTATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:900
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCAACAAAACGCAACAC
Suggested primer 2:TCAGAAGCTTCACTCTGCGG