Insertion junction: CLIP2.053954_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053954
Chromosome:chromosome 17
Location:1211303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802036 (1 of 2) IPR002048//IPR003117 - EF-hand domain // cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAATGTGAAGGTCGCGGGGACAGCACCCCTCATCAACGAGCAGGACT
Internal bar code:CTGGCTCATAGTATATTGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3543
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAAACTTAGCCACGCAC
Suggested primer 2:TAACACCTGCAGCAAAACGC