Insertion junction: CLIP2.053954_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053954
Chromosome:chromosome 17
Location:1211304
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802036 (1 of 2) IPR002048//IPR003117 - EF-hand domain // cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTACCTGTGCGAGGTGGCCGTGAGTGCGGAGTGAAGGCACGCGCCAG
Internal bar code:CAGTCCGCAGTCGGTAGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4893
LEAP-Seq percent confirming:76.4045
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:TAACACCTGCAGCAAAACGC
Suggested primer 2:TTGCAAACTTAGCCACGCAC