Insertion junction: CLIP2.053956_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053956
Chromosome:chromosome 13
Location:870414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567450 HON1 Histone H1; (1 of 3) K11275 - histone H1/5 (H1_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCCTAAACATGTTGCCTGTCCTGCAGATGGTGGCTGATGCCATCAGCA
Internal bar code:ATAGGGTGGAGGAAAGTGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2548
LEAP-Seq percent confirming:73.8636
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGTCTTGATGGCCAGCGA
Suggested primer 2:ACGCAAATGGTTGGCTTGTC