Insertion junction: CLIP2.053957_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053957
Chromosome:chromosome 3
Location:539613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145187 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCTGCCCAGTTGGCAAGCCTGTGCGTGGACGAGACAAGGGAGGCCGC
Internal bar code:TTAGATAACCCCGCTTATGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2205
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCACGTACACCACTACT
Suggested primer 2:GTTGTGCATGACCACACACC