Insertion junction: CLIP2.053960_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053960
Chromosome:chromosome 12
Location:2952600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502251 (1 of 1) PTHR31065:SF4 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTTCCATTTTTGCACGGGTAATGGGGCAGGGACGGCAGGGCAGCTT
Internal bar code:CCTCAGTATCGAGCCAGGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1505
LEAP-Seq percent confirming:73.8462
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACAACATCATGACCAGC
Suggested primer 2:ATAACCACATCGTCCTGCCC