Insertion junction: CLIP2.053965_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.053965
Chromosome:chromosome 12
Location:9651032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558353 (1 of 11) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAGAGCGCCTGTGTGGCCCCCGGCCGTCACACGGCCATGTGAAGCAT
Internal bar code:AATGATTCATCGTGTAGCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:90
LEAP-Seq percent confirming:2.85714
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTATGGGTATGGAGGTG
Suggested primer 2:TAGTCTCCCGCCAAAACCAC