Insertion junction: CLIP2.053967_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.053967
Chromosome:chromosome 10
Location:3935909
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446750 (1 of 2) PTHR13690//PTHR13690:SF71 - FAMILY NOT NAMED // PROTEIN C37C3.9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTAATGACTGACAAGGGAGAAGAATATTCTATGTGTCAGGGTGCCTGT
Internal bar code:TGACATCGGATCAGTGTAGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:912
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTACGACACAACCACCGA
Suggested primer 2:CCACGTGCATGCTGTTATCG