Insertion junction: CLIP2.053969_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053969
Chromosome:chromosome 12
Location:467398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494650 CSV10 Chlamydomonas-specific family protein; (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGCCCCGGCGCGGGCGGCGCGGGTGCGGGCGGCGCGGCCGACGGCAT
Internal bar code:GTAGTTGGGATCTTTAATGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1277
LEAP-Seq percent confirming:60.9375
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTTGCCTGCGTGTTAGC
Suggested primer 2:GAACAACGAGGCAGAGGACA