Insertion junction: CLIP2.053980_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.053980
Chromosome:chromosome 1
Location:7377140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAGTGAAGGGACAGCCCGACAAGCGGGGGCACGCCGTACCCACGCCGC
Internal bar code:GTTTCCAGGCGCCTTGATGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3452
LEAP-Seq percent confirming:64.4444
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGTCATCTCCACAACA
Suggested primer 2:CTAACGACCAGCGGATCTCC