Insertion junction: CLIP2.053983_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.053983
Chromosome:chromosome 4
Location:3507128
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228000 (1 of 1) PF13890 - Rab3 GTPase-activating protein catalytic subunit (Rab3-GTPase_cat) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCGGCTGTCATAACGCCGGGGTTGCTGTACCGCGACTTCGTTGACTT
Internal bar code:GTTTGGTGTGTTTATCTCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:403
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGTACCACAGGCAGAGG
Suggested primer 2:TTTCGACTCACCTCCAACGG