Insertion junction: CLIP2.053996_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.053996
Chromosome:chromosome 10
Location:1856767
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g431050 SRR13 (1 of 1) PTHR19331//PTHR19331:SF253 - LYSYL OXIDASE-RELATED // SUBFAMILY NOT NAMED; Speract/scavenger receptor, transmembrane glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCCAGGTCGGGCGGCAGTAGCATCCCGGCCTCGTAGCCCAGCAGGC
Internal bar code:CAAAATGGAGATACCGAGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:537
LEAP-Seq percent confirming:19.2308
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTAACATGCCTGACCACC
Suggested primer 2:GCACACCTATAGGCGCCTAG