Insertion junction: CLIP2.053998_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.053998
Chromosome:chromosome 13
Location:4569245
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603400 SRH22 (1 of 1) PTHR10799//PTHR10799:SF695 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // RING-FINGER, DEAD-LIKE HELICASE, PHD AND SNF2 DOMAIN-CONTAINING PROTEIN; SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATACAGGCATCCCTCCTTCCCTCCCTCAAGGTGCTCCTCCCCACTCC
Internal bar code:GTGCGTAAGGTTTGGTCTGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1268
LEAP-Seq percent confirming:78.0488
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTGCAGTCGGAGTACC
Suggested primer 2:CTGCTCAATGAAGTCGGGGT