Insertion junction: CLIP2.054000_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.054000
Chromosome:chromosome 1
Location:5837953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041850 (1 of 10) PTHR12270:SF6 - GLYCOSYLTRANSFERASE-LIKE PROTEIN LARGE CDS
Cre01.g800102 (1 of 1) K01411 - nardilysin [EC:3.4.24.61] (NRD1) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGGACGCACGGCACACGCACCTCTTCCACCGCGCCGCCGCCTCCGCC
Internal bar code:TTCGTAATGAGTGGTACTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3093
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTCAGAGGAGGG
Suggested primer 2:GATCCACATCGCCATCGCTA