Insertion junction: CLIP2.054008_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.054008
Chromosome:chromosome 17
Location:6346364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g743547 (1 of 16) IPR003439//IPR003593//IPR013525//IPR027417 - ABC transporter-like // AAA+ ATPase domain // ABC-2 type transporter // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATTGACCGCAGCAAGTTTGCTTGAGTGTTGCTGCGAGCTAGGCTCG
Internal bar code:AGCGCCATATCTATAAGTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1371
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGTCAATGTGTGGCCGA
Suggested primer 2:ATCGCCGCTTATCCTCCTTG