Insertion junction: CLIP2.054010_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.054010
Chromosome:chromosome 16
Location:918324
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648300 PHT6,PHT4-6,PHT4F Sodium-dependent phosphate transporter, major facilitator superfamily; (1 of 3) PTHR11662:SF243 - ANION TRANSPORTER 6, CHLOROPLASTIC-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGGCGACAGATGCGGATGCGGATACGGGTGCTGAAGTGGTAGCTGTG
Internal bar code:TGCTATAACCTTTAAGCTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3083
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGTTATCCCGATCGACTT
Suggested primer 2:GGAGGATAACGCTTCGAGGG